//g++ -O3 -g0 -DNDEBUG sparse_transpose.cpp -I.. -I/home/gael/Coding/LinearAlgebra/mtl4/ -DDENSITY=0.005 -DSIZE=10000 && ./a.out // -DNOGMM -DNOMTL // -DCSPARSE -I /home/gael/Coding/LinearAlgebra/CSparse/Include/ /home/gael/Coding/LinearAlgebra/CSparse/Lib/libcsparse.a #ifndef SIZE #define SIZE 10000 #endif #ifndef DENSITY #define DENSITY 0.01 #endif #ifndef REPEAT #define REPEAT 1 #endif #include "BenchSparseUtil.h" #ifndef MINDENSITY #define MINDENSITY 0.0004 #endif #ifndef NBTRIES #define NBTRIES 10 #endif #define BENCH(X) \ timer.reset(); \ for (int _j=0; _j<NBTRIES; ++_j) { \ timer.start(); \ for (int _k=0; _k<REPEAT; ++_k) { \ X \ } timer.stop(); } int main(int argc, char *argv[]) { int rows = SIZE; int cols = SIZE; float density = DENSITY; EigenSparseMatrix sm1(rows,cols), sm3(rows,cols); BenchTimer timer; for (float density = DENSITY; density>=MINDENSITY; density*=0.5) { fillMatrix(density, rows, cols, sm1); // dense matrices #ifdef DENSEMATRIX { DenseMatrix m1(rows,cols), m3(rows,cols); eiToDense(sm1, m1); BENCH(for (int k=0; k<REPEAT; ++k) m3 = m1.transpose();) std::cout << " Eigen dense:\t" << timer.value() << endl; } #endif std::cout << "Non zeros: " << sm1.nonZeros()/float(sm1.rows()*sm1.cols())*100 << "%\n"; // eigen sparse matrices { BENCH(for (int k=0; k<REPEAT; ++k) sm3 = sm1.transpose();) std::cout << " Eigen:\t" << timer.value() << endl; } // CSparse #ifdef CSPARSE { cs *m1, *m3; eiToCSparse(sm1, m1); BENCH(for (int k=0; k<REPEAT; ++k) { m3 = cs_transpose(m1,1); cs_spfree(m3);}) std::cout << " CSparse:\t" << timer.value() << endl; } #endif // GMM++ #ifndef NOGMM { GmmDynSparse gmmT3(rows,cols); GmmSparse m1(rows,cols), m3(rows,cols); eiToGmm(sm1, m1); BENCH(for (int k=0; k<REPEAT; ++k) gmm::copy(gmm::transposed(m1),m3);) std::cout << " GMM:\t\t" << timer.value() << endl; } #endif // MTL4 #ifndef NOMTL { MtlSparse m1(rows,cols), m3(rows,cols); eiToMtl(sm1, m1); BENCH(for (int k=0; k<REPEAT; ++k) m3 = trans(m1);) std::cout << " MTL4:\t\t" << timer.value() << endl; } #endif std::cout << "\n\n"; } return 0; }